Results from an EMSL Arrows Calculation
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The id(s) for emsiles = O=[Ho] theory{dft} xc{pbe} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{1} basisHZ{Def2-TZVP} mult{3} are: 73506 Use id=% instead of esmiles to print other entries. mformula = Ho1O1 iupac = O=[Ho] triplet radical cation PubChem = PubChem LCSS = Search Links to Other Online Resources (may not be available): - Google Structure Search - EPA CompTox Database - Chemical Entities of Biological Interest (ChEBI) - NIH ChemIDplus - A TOXNET DATABASE - The Human Metabolome Database (HMDB) - OECD eChemPortal - Google Scholar +==================================================+ || Molecular Calculation || +==================================================+ Id = 73506 NWOutput = Link to NWChem Output (download) Datafiles: homo-alpha.cube-798587-2022-5-7-21:37:51 (download) homo-beta.cube-798587-2022-5-7-21:37:51 (download) lumo-alpha.cube-798587-2022-5-7-21:37:51 (download) lumo-beta.cube-798587-2022-5-7-21:37:51 (download) mo_orbital_tifany-169244.out00-342841-2022-9-15-20:44:45 (download) image_resset: api/image_reset/73506 Calculation performed by Eric Bylaska - constance.pnl.gov Numbers of cpus used for calculation = 48 Calculation walltime = 4506.500000 seconds (0 days 1 hours 15 minutes 6 seconds) +----------------+ | Energetic Data | +----------------+ Id = 73506 iupac = O=[Ho] triplet radical cation mformula = Ho1O1 inchi = InChI=1S/Ho.O inchikey = DLEZKZIXIQFBTK-UHFFFAOYSA-N esmiles = O=[Ho] theory{dft} xc{pbe} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{1} basisHZ{Def2-TZVP} mult{3} calculation_type = ovc theory = dft xc = pbe basis = 6-311++G(2d,2p) charge,mult = 1 3 energy = -1023.416213 Hartrees enthalpy correct.= 0.005059 Hartrees entropy = 56.381 cal/mol-K solvation energy = -103.270 kcal/mol solvation_type = COSMO Sitkoff cavity dispersion = 0.000 kcal/mol Honig cavity dispersion = 0.000 kcal/mol ASA solvent accesible surface area = 0.000 Angstrom2 ASA solvent accesible volume = 0.000 Angstrom3 +-----------------+ | Structural Data | +-----------------+
JSmol: an open-source HTML5 viewer for chemical structures in 3D
Number of Atoms = 2 Units are Angstrom for bonds and degrees for angles Type I J K L M Value ----------- ----- ----- ----- ----- ----- ---------- 1 Stretch Ho1 O2 1.80429
+-----------------+ | Eigenvalue Data | +-----------------+ Id = 73506 iupac = O=[Ho] triplet radical cation mformula = Ho1O1 InChI = InChI=1S/Ho.O smiles = O=[Ho] esmiles = O=[Ho] theory{dft} xc{pbe} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{1} basisHZ{Def2-TZVP} mult{3} theory = dft xc = pbe basis = 6-311++G(2d,2p) charge = 1 mult = 3 solvation_type = COSMO twirl webpage = TwirlMol Link image webpage = GIF Image Link Unrestricted Eigevalue Spectra alpha beta ---- ---- 65.60 eV ---- ---- 65.73 eV ---------- ---------- ---- ---- --- -- --- ---------- ---- ---- ---- ---- ---------- -- -- -- - --- -- --- ---- ---- ---- ---- ---------- ---------- ---- ---- ---- ---- ---------- ---------- ---- ---- - - - - -- --- -- --- --- -- --- --- -- --- ---- ---- ---------- ---- ---- --- -- --- ---- ---- ---- ---- -- -- -- - -- -- -- - ---------- ---------- ---------- ---------- -- -- -- - -- -- -- - ---- ---- ---- ---- -- -- -- - --- -- --- ---- ---- --- -- --- ---------- --- -- --- 6 - - - - 6 - - - - --- -- --- ---------- --- -- ---LUMO= -3.98 eV ----------LUMO= -5.83HOMO= -5.63 eV+++ ++ +++ HOMO= -6.63 eV7 + + + + ++ ++ ++ + ++++ ++++ ++++++++++ ++++++++++ ++++ ++++ ++++ ++++ -28.50 eV++++++++++ -28.20 eV++++++++++
spin eig occ ---------------------------- alpha -51.99 1.00 alpha -28.50 1.00 alpha -27.23 1.00 alpha -27.21 1.00 alpha -20.18 1.00 alpha -8.66 1.00 alpha -8.57 1.00 alpha -7.97 1.00 alpha -7.51 1.00 alpha -7.36 1.00 alpha -7.18 1.00 alpha -6.76 1.00 alpha -6.70 1.00 alpha -6.63 1.00 alpha -5.83 0.00 alpha -2.13 0.00 alpha -0.68 0.00 alpha -0.64 0.00 alpha 0.22 0.00 alpha 0.23 0.00 alpha 0.57 0.00 alpha 1.07 0.00 alpha 1.28 0.00 alpha 1.30 0.00 alpha 2.52 0.00 alpha 4.77 0.00 alpha 4.77 0.00 alpha 5.25 0.00 alpha 6.05 0.00 alpha 6.06 0.00 alpha 6.26 0.00 alpha 8.12 0.00 alpha 8.18 0.00 alpha 9.35 0.00 alpha 9.36 0.00 alpha 9.52 0.00 alpha 10.51 0.00 alpha 14.07 0.00 alpha 16.45 0.00 alpha 19.50 0.00 alpha 19.55 0.00 alpha 20.06 0.00 alpha 20.15 0.00 alpha 21.84 0.00 alpha 21.87 0.00 alpha 22.53 0.00 alpha 22.56 0.00 alpha 24.40 0.00 alpha 25.93 0.00 alpha 27.17 0.00 alpha 27.18 0.00 alpha 27.54 0.00 alpha 28.24 0.00 alpha 28.29 0.00 alpha 28.69 0.00 alpha 29.95 0.00 alpha 29.97 0.00 alpha 37.01 0.00 alpha 38.62 0.00 alpha 38.62 0.00 alpha 43.10 0.00 alpha 44.37 0.00 alpha 44.38 0.00 alpha 49.18 0.00 alpha 49.18 0.00 alpha 49.21 0.00 alpha 49.23 0.00 alpha 52.84 0.00 alpha 52.86 0.00 alpha 55.73 0.00 alpha 56.91 0.00 alpha 56.92 0.00 alpha 63.57 0.00 alpha 65.55 0.00 alpha 65.60 0.00 beta -50.97 1.00 beta -28.20 1.00 beta -26.37 1.00 beta -26.34 1.00 beta -20.47 1.00 beta -8.16 1.00 beta -7.61 1.00 beta -7.58 1.00 beta -6.41 1.00 beta -5.92 1.00 beta -5.77 1.00 beta -5.63 1.00 beta -3.98 0.00 beta -3.93 0.00 beta -3.61 0.00 beta -2.06 0.00 beta -0.39 0.00 beta -0.36 0.00 beta 0.35 0.00 beta 0.36 0.00 beta 0.45 0.00 beta 1.07 0.00 beta 1.42 0.00 beta 1.43 0.00 beta 2.44 0.00 beta 4.76 0.00 beta 4.76 0.00 beta 5.08 0.00 beta 6.16 0.00 beta 6.16 0.00 beta 6.19 0.00 beta 8.30 0.00 beta 8.36 0.00 beta 9.44 0.00 beta 9.45 0.00 beta 9.56 0.00 beta 10.42 0.00 beta 14.00 0.00 beta 16.46 0.00 beta 19.67 0.00 beta 19.74 0.00 beta 20.23 0.00 beta 20.51 0.00 beta 22.01 0.00 beta 22.04 0.00 beta 22.75 0.00 beta 22.79 0.00 beta 24.03 0.00 beta 25.81 0.00 beta 27.14 0.00 beta 27.15 0.00 beta 27.30 0.00 beta 28.58 0.00 beta 28.62 0.00 beta 28.71 0.00 beta 30.17 0.00 beta 30.18 0.00 beta 36.84 0.00 beta 38.61 0.00 beta 38.62 0.00 beta 43.22 0.00 beta 44.09 0.00 beta 44.10 0.00 beta 49.28 0.00 beta 49.32 0.00 beta 49.33 0.00 beta 49.41 0.00 beta 52.95 0.00 beta 52.97 0.00 beta 55.63 0.00 beta 57.32 0.00 beta 57.33 0.00 beta 63.60 0.00 beta 65.69 0.00 beta 65.73 0.00
+----------------------------------------+ | Vibrational Density of States Analysis | +----------------------------------------+ Total number of frequencies = 6 Total number of negative frequencies = 0 Number of lowest frequencies = 0 (frequency threshold = 500 ) Exact dos norm = 0.000 Generating vibrational DOS Generating model vibrational DOS to have a proper norm 10.00 1.00 0.00 1.00 50.00 1.00 0.00 1.00 100.00 1.00 0.00 1.00 Generating IR Spectra Writing vibrational density of states (DOS) to vdos.dat Writing model vibrational density of states (DOS_FIXED) to vdos-model.dat Writing IR spectra to irdos.dat Temperature= 298.15 zero-point correction to energy = 1.037 kcal/mol ( 0.001653) vibrational contribution to enthalpy correction = 1.102 kcal/mol ( 0.001755) vibrational contribution to Entropy = 0.277 cal/mol-k hindered rotor enthalpy correction = 0.000 kcal/mol ( 0.000000) hindered rotor entropy correction = 0.000 cal/mol-k
DOS sigma = 10.000000 - vibrational DOS enthalpy correction = 0.001756 kcal/mol ( 1.102 kcal/mol) - model vibrational DOS enthalpy correction = 0.001756 kcal/mol ( 1.102 kcal/mol) - vibrational DOS Entropy = 0.000000 ( 0.277 cal/mol-k) - model vibrational DOS Entropy = 0.000000 ( 0.277 cal/mol-k) - original gas Energy = -1023.416213 (-642203.365 kcal/mol) - original gas Enthalpy = -1023.411154 (-642200.190 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -1023.411154 (-642200.190 kcal/mol, delta= 0.000) - model DOS gas Enthalpy = -1023.411154 (-642200.190 kcal/mol, delta= 0.000) - original gas Entropy = 0.000090 ( 56.381 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000090 ( 56.381 cal/mol-k,delta= 0.000) - model DOS gas Entropy = 0.000090 ( 56.381 cal/mol-k,delta= 0.000) - original gas Free Energy = -1023.437943 (-642217.000 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -1023.437943 (-642217.000 kcal/mol, delta= -0.000) - model DOS gas Free Energy = -1023.437943 (-642217.000 kcal/mol, delta= -0.000) - original sol Free Energy = -1023.602514 (-642320.270 kcal/mol) - unadjusted DOS sol Free Energy = -1023.602514 (-642320.270 kcal/mol) - model DOS sol Free Energy = -1023.602514 (-642320.270 kcal/mol) DOS sigma = 50.000000 - vibrational DOS enthalpy correction = 0.001757 kcal/mol ( 1.103 kcal/mol) - model vibrational DOS enthalpy correction = 0.001757 kcal/mol ( 1.103 kcal/mol) - vibrational DOS Entropy = 0.000000 ( 0.282 cal/mol-k) - model vibrational DOS Entropy = 0.000000 ( 0.282 cal/mol-k) - original gas Energy = -1023.416213 (-642203.365 kcal/mol) - original gas Enthalpy = -1023.411154 (-642200.190 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -1023.411153 (-642200.189 kcal/mol, delta= 0.001) - model DOS gas Enthalpy = -1023.411153 (-642200.189 kcal/mol, delta= 0.001) - original gas Entropy = 0.000090 ( 56.381 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000090 ( 56.386 cal/mol-k,delta= 0.005) - model DOS gas Entropy = 0.000090 ( 56.386 cal/mol-k,delta= 0.005) - original gas Free Energy = -1023.437943 (-642217.000 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -1023.437944 (-642217.001 kcal/mol, delta= -0.001) - model DOS gas Free Energy = -1023.437944 (-642217.001 kcal/mol, delta= -0.001) - original sol Free Energy = -1023.602514 (-642320.270 kcal/mol) - unadjusted DOS sol Free Energy = -1023.602515 (-642320.271 kcal/mol) - model DOS sol Free Energy = -1023.602515 (-642320.271 kcal/mol) DOS sigma = 100.000000 - vibrational DOS enthalpy correction = 0.001762 kcal/mol ( 1.105 kcal/mol) - model vibrational DOS enthalpy correction = 0.001762 kcal/mol ( 1.105 kcal/mol) - vibrational DOS Entropy = 0.000000 ( 0.298 cal/mol-k) - model vibrational DOS Entropy = 0.000000 ( 0.298 cal/mol-k) - original gas Energy = -1023.416213 (-642203.365 kcal/mol) - original gas Enthalpy = -1023.411154 (-642200.190 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -1023.411148 (-642200.186 kcal/mol, delta= 0.004) - model DOS gas Enthalpy = -1023.411148 (-642200.186 kcal/mol, delta= 0.004) - original gas Entropy = 0.000090 ( 56.381 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000090 ( 56.402 cal/mol-k,delta= 0.021) - model DOS gas Entropy = 0.000090 ( 56.402 cal/mol-k,delta= 0.021) - original gas Free Energy = -1023.437943 (-642217.000 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -1023.437947 (-642217.002 kcal/mol, delta= -0.002) - model DOS gas Free Energy = -1023.437947 (-642217.002 kcal/mol, delta= -0.002) - original sol Free Energy = -1023.602514 (-642320.270 kcal/mol) - unadjusted DOS sol Free Energy = -1023.602518 (-642320.272 kcal/mol) - model DOS sol Free Energy = -1023.602518 (-642320.272 kcal/mol) Normal Mode Frequency (cm-1) IR Intensity (arbitrary) ----------- ---------------- ------------------------ 1 -0.000 8.215 2 0.000 6.297 3 0.000 6.317 4 0.000 8.143 5 0.000 2.397 6 725.860 28.631 No Hindered Rotor Data +-------------------------------------+ | Reactions Contained in the Database | +-------------------------------------+ Reactions Containing INCHIKEY = DLEZKZIXIQFBTK-UHFFFAOYSA-N Reactionid Erxn(gas) Hrxn(gas) Grxn(gas) delta_Solv Grxn(aq) ReactionType Reaction
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KEYWORDs - reaction: :reaction chinese_room: :chinese_room molecule: :molecule nmr: :nmr predict: :predict submitesmiles: :submitesmiles nosubmitmissingesmiles resubmitmissingesmiles submitmachines: :submitmachines useallentries nomodelcorrect eigenvalues: :eigenvalues frequencies: :frequencies nwoutput: :nwoutput xyzfile: :xyzfile alleigs: :alleigs allfreqs: :allfreqs reactionenumerate: energytype:[erxn(gas) hrxn(gas) grxn(gas) delta_solvation grxn(aq)] :energytype energytype:[kcal/mol kj/mol ev cm-1 ry hartree au] :energytype tablereactions: reaction: ... :reaction reaction: ... :reaction ... :tablereactions tablemethods: method: ... :method method: ... :method ... :tablemethods :reactionenumerate rotatebonds xyzinput: label: :label xyzdata: ... xyz data ... :xyzdata :xyzinput submitHf: :submitHf nmrexp: :nmrexp findreplace: old text | new text :findreplace listnwjobs fetchnwjob: :fetchnwjob pushnwjob: :pushnwjob printcsv: :printcsv printeig: :printeig printfreq: :printfreq printxyz: :printxyz printjobinfo: :printjobinfo printnwout: :printnwout badids: :badids hup_string: database: table: request_table: listallesmiles queuecheckThis software service and its documentation were developed at the Environmental Molecular Sciences Laboratory (EMSL) at Pacific Northwest National Laboratory, a multiprogram national laboratory, operated for the U.S. Department of Energy by Battelle under Contract Number DE-AC05-76RL01830. Support for this work was provided by the Department of Energy Office of Biological and Environmental Research, and Department of Defense environmental science and technology program (SERDP). THE SOFTWARE SERVICE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE SERVICE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE SERVICE.