Results from an EMSL Arrows Calculation
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The id(s) for emsiles = CO[C][O] theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{1} are: 58963 Use id=% instead of esmiles to print other entries. mformula = C2H3O2 iupac = methoxymethanol cation PubChem = 62540 PubChem LCSS = 62540 cas = 4461-52-3 synonyms = Methoxymethanol; Methanol, methoxy-; 4461-52-3; Methanol, 1-methoxy-; UNII-9T7K15960E; EINECS 224-722-2; 9T7K15960E; MeOCH2OH; CO[C]O; COC[O]; DTXSID4027571; CHEBI:46791; CTK4I8340; ZINC64624515; AKOS006279796; LS-91030; Q27120701 Search Links to Other Online Resources (may not be available): - Google Structure Search - EPA CompTox Database - Chemical Entities of Biological Interest (ChEBI) - NIH ChemIDplus - A TOXNET DATABASE - The Human Metabolome Database (HMDB) - OECD eChemPortal - Google Scholar +==================================================+ || Molecular Calculation || +==================================================+ Id = 58963 NWOutput = Link to NWChem Output (download) Datafiles: homo-restricted.cube-696468-2020-12-20-11:42:38 (download) lumo-restricted.cube-696468-2020-12-20-11:42:38 (download) mo_orbital_nwchemarrows-2022-1-10-17-55-141380.out-604505-2022-1-12-16:47:27 (download) image_resset: api/image_reset/58963 Calculation performed by Eric Bylaska - constance.pnl.gov Numbers of cpus used for calculation = 48 Calculation walltime = 424.800000 seconds (0 days 0 hours 7 minutes 4 seconds) +----------------+ | Energetic Data | +----------------+ Id = 58963 iupac = methoxymethanol cation mformula = C2H3O2 inchi = InChI=1S/C2H3O2/c1-4-2-3/h1H3 inchikey = RZWIXMSKICMDRK-UHFFFAOYSA-N esmiles = CO[C][O] theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{1} calculation_type = ovc theory = dft xc = b3lyp basis = 6-311++G(2d,2p) charge,mult = 1 1 energy = -228.205770 Hartrees enthalpy correct.= 0.055887 Hartrees entropy = 69.618 cal/mol-K solvation energy = -63.767 kcal/mol solvation_type = COSMO Sitkoff cavity dispersion = 1.863 kcal/mol Honig cavity dispersion = 5.017 kcal/mol ASA solvent accesible surface area = 200.682 Angstrom2 ASA solvent accesible volume = 189.683 Angstrom3 +-----------------+ | Structural Data | +-----------------+
JSmol: an open-source HTML5 viewer for chemical structures in 3D
Number of Atoms = 7 Units are Angstrom for bonds and degrees for angles Type I J K L M Value ----------- ----- ----- ----- ----- ----- ---------- 1 Stretch C1 H5 1.08133 2 Stretch C1 H6 1.08288 3 Stretch C1 H7 1.08288 4 Stretch O2 C3 1.20131 5 Stretch C3 O4 1.13052 6 Bend H5 C1 H6 114.32459 7 Bend H5 C1 H7 114.32461 8 Bend H6 C1 H7 115.45000 9 Bend O2 C3 O4 176.21056
+-----------------+ | Eigenvalue Data | +-----------------+ Id = 58963 iupac = methoxymethanol cation mformula = C2H3O2 InChI = InChI=1S/C2H3O2/c1-4-2-3/h1H3 smiles = CO[C][O] esmiles = CO[C][O] theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{1} theory = dft xc = b3lyp basis = 6-311++G(2d,2p) charge = 1 mult = 1 solvation_type = COSMO twirl webpage = TwirlMol Link image webpage = GIF Image Link Eigevalue Spectra ---------- 65.13 eV ---- ---- ---------- ---------- ---------- ---- ---- ---------- ---- ---- -- -- -- - ---- ---- ---- ---- ---------- ---- ---- -- -- -- - - - - - -- --- -- --- ---- ---- ---- ---- --- -- --- - - - - -- ---- ---- ---- ---- --- -- --- - - - - -- - - - - -- 6 - - - - -- -- -- - --- -- --- LUMO= -2.79 eV HOMO= -11.89 eV ++++ ++++ ++++ ++++ +++ ++ +++ ++++++++++ ++++++++++ -34.30 eV ++++ ++++
spin eig occ ---------------------------- restricted -34.30 2.00 restricted -33.34 2.00 restricted -22.48 2.00 restricted -17.79 2.00 restricted -16.64 2.00 restricted -16.50 2.00 restricted -16.47 2.00 restricted -13.79 2.00 restricted -13.61 2.00 restricted -12.40 2.00 restricted -11.89 2.00 restricted -2.79 0.00 restricted -1.52 0.00 restricted -1.48 0.00 restricted 0.08 0.00 restricted 0.70 0.00 restricted 0.98 0.00 restricted 0.99 0.00 restricted 1.76 0.00 restricted 2.06 0.00 restricted 2.24 0.00 restricted 2.56 0.00 restricted 2.62 0.00 restricted 2.87 0.00 restricted 3.30 0.00 restricted 4.13 0.00 restricted 4.58 0.00 restricted 4.59 0.00 restricted 4.85 0.00 restricted 5.86 0.00 restricted 6.65 0.00 restricted 6.96 0.00 restricted 7.03 0.00 restricted 7.24 0.00 restricted 7.60 0.00 restricted 7.71 0.00 restricted 8.22 0.00 restricted 10.70 0.00 restricted 11.07 0.00 restricted 12.39 0.00 restricted 12.83 0.00 restricted 13.74 0.00 restricted 14.02 0.00 restricted 14.41 0.00 restricted 14.45 0.00 restricted 15.03 0.00 restricted 15.61 0.00 restricted 16.43 0.00 restricted 16.95 0.00 restricted 17.89 0.00 restricted 18.87 0.00 restricted 19.97 0.00 restricted 21.15 0.00 restricted 22.19 0.00 restricted 23.22 0.00 restricted 23.35 0.00 restricted 25.72 0.00 restricted 26.39 0.00 restricted 26.81 0.00 restricted 27.34 0.00 restricted 27.44 0.00 restricted 28.29 0.00 restricted 28.31 0.00 restricted 29.11 0.00 restricted 29.43 0.00 restricted 30.02 0.00 restricted 31.27 0.00 restricted 31.93 0.00 restricted 34.86 0.00 restricted 35.22 0.00 restricted 36.27 0.00 restricted 37.38 0.00 restricted 37.86 0.00 restricted 38.05 0.00 restricted 39.11 0.00 restricted 39.59 0.00 restricted 40.35 0.00 restricted 41.47 0.00 restricted 42.44 0.00 restricted 47.04 0.00 restricted 47.51 0.00 restricted 50.60 0.00 restricted 52.98 0.00 restricted 61.07 0.00 restricted 62.61 0.00 restricted 62.88 0.00 restricted 65.13 0.00
+----------------------------------------+ | Vibrational Density of States Analysis | +----------------------------------------+ Total number of frequencies = 21 Total number of negative frequencies = 0 Number of lowest frequencies = 2 (frequency threshold = 500 ) Exact dos norm = 15.000 Generating vibrational DOS Generating model vibrational DOS to have a proper norm 10.00 15.01 2.00 15.00 50.00 14.89 1.89 15.00 100.00 14.69 1.69 15.00 Generating IR Spectra Writing vibrational density of states (DOS) to vdos.dat Writing model vibrational density of states (DOS_FIXED) to vdos-model.dat Writing IR spectra to irdos.dat Temperature= 298.15 zero-point correction to energy = 31.486 kcal/mol ( 0.050177) vibrational contribution to enthalpy correction = 32.701 kcal/mol ( 0.052112) vibrational contribution to Entropy = 8.204 cal/mol-k hindered rotor enthalpy correction = 0.000 kcal/mol ( 0.000000) hindered rotor entropy correction = 0.000 cal/mol-k
DOS sigma = 10.000000 - vibrational DOS enthalpy correction = 0.052112 kcal/mol ( 32.701 kcal/mol) - model vibrational DOS enthalpy correction = 0.052107 kcal/mol ( 32.698 kcal/mol) - vibrational DOS Entropy = 0.000013 ( 8.236 cal/mol-k) - model vibrational DOS Entropy = 0.000013 ( 8.217 cal/mol-k) - original gas Energy = -228.205770 (-143201.281 kcal/mol) - original gas Enthalpy = -228.149883 (-143166.212 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -228.149882 (-143166.211 kcal/mol, delta= 0.000) - model DOS gas Enthalpy = -228.149888 (-143166.215 kcal/mol, delta= -0.003) - original gas Entropy = 0.000111 ( 69.618 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000111 ( 69.651 cal/mol-k,delta= 0.033) - model DOS gas Entropy = 0.000111 ( 69.632 cal/mol-k,delta= 0.014) - original gas Free Energy = -228.182961 (-143186.968 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -228.182975 (-143186.978 kcal/mol, delta= -0.009) - model DOS gas Free Energy = -228.182972 (-143186.976 kcal/mol, delta= -0.007) - original sol Free Energy = -228.284579 (-143250.735 kcal/mol) - unadjusted DOS sol Free Energy = -228.284594 (-143250.744 kcal/mol) - model DOS sol Free Energy = -228.284590 (-143250.742 kcal/mol) DOS sigma = 50.000000 - vibrational DOS enthalpy correction = 0.052037 kcal/mol ( 32.654 kcal/mol) - model vibrational DOS enthalpy correction = 0.052149 kcal/mol ( 32.724 kcal/mol) - vibrational DOS Entropy = 0.000013 ( 8.370 cal/mol-k) - model vibrational DOS Entropy = 0.000014 ( 8.780 cal/mol-k) - original gas Energy = -228.205770 (-143201.281 kcal/mol) - original gas Enthalpy = -228.149883 (-143166.212 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -228.149957 (-143166.259 kcal/mol, delta= -0.047) - model DOS gas Enthalpy = -228.149846 (-143166.188 kcal/mol, delta= 0.023) - original gas Entropy = 0.000111 ( 69.618 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000111 ( 69.785 cal/mol-k,delta= 0.167) - model DOS gas Entropy = 0.000112 ( 70.195 cal/mol-k,delta= 0.577) - original gas Free Energy = -228.182961 (-143186.968 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -228.183114 (-143187.065 kcal/mol, delta= -0.097) - model DOS gas Free Energy = -228.183197 (-143187.117 kcal/mol, delta= -0.149) - original sol Free Energy = -228.284579 (-143250.735 kcal/mol) - unadjusted DOS sol Free Energy = -228.284733 (-143250.832 kcal/mol) - model DOS sol Free Energy = -228.284816 (-143250.884 kcal/mol) DOS sigma = 100.000000 - vibrational DOS enthalpy correction = 0.051903 kcal/mol ( 32.569 kcal/mol) - model vibrational DOS enthalpy correction = 0.052212 kcal/mol ( 32.763 kcal/mol) - vibrational DOS Entropy = 0.000012 ( 7.412 cal/mol-k) - model vibrational DOS Entropy = 0.000013 ( 8.460 cal/mol-k) - original gas Energy = -228.205770 (-143201.281 kcal/mol) - original gas Enthalpy = -228.149883 (-143166.212 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -228.150092 (-143166.343 kcal/mol, delta= -0.131) - model DOS gas Enthalpy = -228.149783 (-143166.149 kcal/mol, delta= 0.063) - original gas Entropy = 0.000111 ( 69.618 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000110 ( 68.827 cal/mol-k,delta= -0.791) - model DOS gas Entropy = 0.000111 ( 69.874 cal/mol-k,delta= 0.256) - original gas Free Energy = -228.182961 (-143186.968 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -228.182794 (-143186.864 kcal/mol, delta= 0.105) - model DOS gas Free Energy = -228.182982 (-143186.982 kcal/mol, delta= -0.014) - original sol Free Energy = -228.284579 (-143250.735 kcal/mol) - unadjusted DOS sol Free Energy = -228.284412 (-143250.630 kcal/mol) - model DOS sol Free Energy = -228.284601 (-143250.749 kcal/mol) Normal Mode Frequency (cm-1) IR Intensity (arbitrary) ----------- ---------------- ------------------------ 1 -0.000 0.552 2 -0.000 3.279 3 -0.000 0.536 4 -0.000 2.987 5 0.000 0.568 6 0.000 3.521 7 60.720 0.094 8 183.820 2.072 9 542.360 19.031 10 602.700 5.933 11 708.810 11.521 12 1112.560 0.154 13 1135.400 0.178 14 1289.740 24.504 15 1450.170 3.204 16 1469.990 1.262 17 1471.590 3.777 18 2423.490 122.394 19 3107.780 1.241 20 3233.370 1.275 21 3243.140 1.916 No Hindered Rotor Data +-------------------------------------+ | Reactions Contained in the Database | +-------------------------------------+ Reactions Containing INCHIKEY = RZWIXMSKICMDRK-UHFFFAOYSA-N Reactionid Erxn(gas) Hrxn(gas) Grxn(gas) delta_Solv Grxn(aq) ReactionType Reaction
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KEYWORDs - reaction: :reaction chinese_room: :chinese_room molecule: :molecule nmr: :nmr predict: :predict submitesmiles: :submitesmiles nosubmitmissingesmiles resubmitmissingesmiles submitmachines: :submitmachines useallentries nomodelcorrect eigenvalues: :eigenvalues frequencies: :frequencies nwoutput: :nwoutput xyzfile: :xyzfile alleigs: :alleigs allfreqs: :allfreqs reactionenumerate: energytype:[erxn(gas) hrxn(gas) grxn(gas) delta_solvation grxn(aq)] :energytype energytype:[kcal/mol kj/mol ev cm-1 ry hartree au] :energytype tablereactions: reaction: ... :reaction reaction: ... :reaction ... :tablereactions tablemethods: method: ... :method method: ... :method ... :tablemethods :reactionenumerate rotatebonds xyzinput: label: :label xyzdata: ... xyz data ... :xyzdata :xyzinput submitHf: :submitHf nmrexp: :nmrexp findreplace: old text | new text :findreplace listnwjobs fetchnwjob: :fetchnwjob pushnwjob: :pushnwjob printcsv: :printcsv printeig: :printeig printfreq: :printfreq printxyz: :printxyz printjobinfo: :printjobinfo printnwout: :printnwout badids: :badids hup_string: database: table: request_table: listallesmiles queuecheckThis software service and its documentation were developed at the Environmental Molecular Sciences Laboratory (EMSL) at Pacific Northwest National Laboratory, a multiprogram national laboratory, operated for the U.S. Department of Energy by Battelle under Contract Number DE-AC05-76RL01830. Support for this work was provided by the Department of Energy Office of Biological and Environmental Research, and Department of Defense environmental science and technology program (SERDP). THE SOFTWARE SERVICE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE SERVICE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE SERVICE.