Results from an EMSL Arrows Calculation
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The id(s) for emsiles = [Na]Oc1ccccc1 theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{0} are: 29445 Use id=% instead of esmiles to print other entries. mformula = C6H5Na1O1 iupac = sodium;phenoxide PubChem = 4445035 PubChem LCSS = 4445035 cas = 139-02-6 kegg = D05455 synonyms = Sodium phenoxide; SODIUM PHENOLATE; sodium benzenolate; 139-02-6; Sodium phenate; Phenolate sodium; Sodium carbolate; Phenol, sodium salt; Phenol sodium; Phenol sodium salt; Caswell No. 786A; Phenolate sodium [USAN]; Phenol, sodium salt (solid); Phenol, sodium salt (1:1); UNII-4NC0T56V35; CHEBI:52476; HSDB 5623; EINECS 205-347-3; EPA Pesticide Chemical Code 064002; Phenolate sodium (USAN); DSSTox_CID_7072; DSSTox_RID_78300; DSSTox_GSID_27072; CAS-139-02-6; C6H5NaO; C6H5O.Na; AC1NBL93; AC1Q1VA0; SCHEMBL22191; T62006_ALDRICH; 390070_ALDRICH; 108-95-2 (Parent); SODIUM PHENOXIDE, 98%; CHEMBL2107497; CTK3J0989; MolPort-006-110-974; NESLWCLHZZISNB-UHFFFAOYSA-M; 4NC0T56V35; EBD54533; Tox21_202212; Tox21_303251; ANW-20488; AR-1L5180; AKOS009031400; RTR-005136; NCGC00257188-01; NCGC00259761-01; AN-23151; OR025465; SC-70023; KB-259867; LS-105116; TR-005136; FT-0631807; W3042; D05455; I01-17183; 3B3-049847; Benzenesulfonicacid,4-hydroxy-,polymerwithformaldehydeand4,4-sulfonylbisphenol,sodiumsalt; 860383-26-2 Search Links to Other Online Resources (may not be available): - Google Structure Search - EPA CompTox Database - Chemical Entities of Biological Interest (ChEBI) - NIH ChemIDplus - A TOXNET DATABASE - The Human Metabolome Database (HMDB) - OECD eChemPortal - Google Scholar +==================================================+ || Molecular Calculation || +==================================================+ Id = 29445 NWOutput = Link to NWChem Output (download) Datafiles: lumo-restricted.cube-2016-5-31-3:1:50 (download) homo-restricted.cube-2016-5-31-3:1:50 (download) mo_orbital_nwchemarrows-we20961.out-852151-2021-6-20-3:37:2 (download) image_resset: api/image_reset/29445 Calculation performed by we19993 Numbers of cpus used for calculation = 2 Calculation walltime = 69506.000000 seconds (0 days 19 hours 18 minutes 26 seconds) +----------------+ | Energetic Data | +----------------+ Id = 29445 iupac = sodium;phenoxide mformula = C6H5Na1O1 inchi = InChI=1S/C6H6O.Na/c7-6-4-2-1-3-5-6;/h1-5,7H;/q;+1/p-1 inchikey = NESLWCLHZZISNB-UHFFFAOYSA-M esmiles = [Na]Oc1ccccc1 theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{0} calculation_type = ovc theory = dft xc = b3lyp basis = 6-311++G(2d,2p) charge,mult = 0 1 energy = -469.303229 Hartrees enthalpy correct.= 0.100965 Hartrees entropy = 86.777 cal/mol-K solvation energy = -22.411 kcal/mol solvation_type = COSMO Sitkoff cavity dispersion = 2.489 kcal/mol Honig cavity dispersion = 8.145 kcal/mol ASA solvent accesible surface area = 325.781 Angstrom2 ASA solvent accesible volume = 340.232 Angstrom3 +-----------------+ | Structural Data | +-----------------+
JSmol: an open-source HTML5 viewer for chemical structures in 3D
Number of Atoms = 13 Units are Angstrom for bonds and degrees for angles Type I J K L M Value ----------- ----- ----- ----- ----- ----- ---------- 1 Stretch C1 C2 1.39377 2 Stretch C1 C6 1.39369 3 Stretch C1 H9 1.08120 4 Stretch C2 C3 1.38808 5 Stretch C2 H10 1.08351 6 Stretch C3 C4 1.41429 7 Stretch C3 H11 1.08315 8 Stretch C4 C5 1.41418 9 Stretch C4 O7 1.31161 10 Stretch C5 C6 1.38816 11 Stretch C5 H12 1.08314 12 Stretch C6 H13 1.08351 13 Stretch O7 Na8 1.98028 14 Bend C2 C1 C6 118.49240 15 Bend C2 C1 H9 120.75006 16 Bend C6 C1 H9 120.75754 17 Bend C1 C2 C3 120.99228 18 Bend C1 C2 H10 119.71693 19 Bend C3 C2 H10 119.29079 20 Bend C2 C3 C4 121.43805 21 Bend C2 C3 H11 120.49889 22 Bend C4 C3 H11 118.06306 23 Bend C3 C4 C5 116.64602 24 Bend C3 C4 O7 121.67287 25 Bend C5 C4 O7 121.68111 26 Bend C4 C5 C6 121.43595 27 Bend C4 C5 H12 118.08587 28 Bend C6 C5 H12 120.47818 29 Bend C1 C6 C5 120.99530 30 Bend C1 C6 H13 119.72392 31 Bend C5 C6 H13 119.28078 32 Bend C4 O7 Na8 179.94241 33 Dihedral C1 C2 C3 C4 -0.00504 34 Dihedral C1 C2 C3 H11 179.99253 35 Dihedral C1 C6 C5 C4 0.00538 36 Dihedral C1 C6 C5 H12 -179.99790 37 Dihedral C2 C1 C6 C5 -0.00324 38 Dihedral C2 C1 C6 H13 -179.99654 39 Dihedral C2 C3 C4 C5 0.00677 40 Dihedral C2 C3 C4 O7 -179.99520 41 Dihedral C3 C2 C1 C6 0.00307 42 Dihedral C3 C2 C1 H9 179.99511 43 Dihedral C3 C4 C5 C6 -0.00694 44 Dihedral C3 C4 C5 H12 179.99627 45 Dihedral C3 C4 O7 Na8 -73.18616 46 Dihedral C4 C3 C2 H10 179.99524 47 Dihedral C4 C5 C6 H13 179.99871 48 Dihedral C5 C4 C3 H11 -179.99086 49 Dihedral C5 C4 O7 Na8 106.81177 50 Dihedral C5 C6 C1 H9 -179.99528 51 Dihedral C6 C1 C2 H10 -179.99721 52 Dihedral C6 C5 C4 O7 179.99503 53 Dihedral O7 C4 C3 H11 0.00718 54 Dihedral O7 C4 C5 H12 -0.00176 55 Dihedral H9 C1 C2 H10 -0.00517 56 Dihedral H9 C1 C6 H13 0.01142 57 Dihedral H10 C2 C3 H11 -0.00719 58 Dihedral H12 C5 C6 H13 -0.00457
+-----------------+ | Eigenvalue Data | +-----------------+ Id = 29445 iupac = sodium;phenoxide mformula = C6H5Na1O1 InChI = InChI=1S/C6H6O.Na/c7-6-4-2-1-3-5-6;/h1-5,7H;/q;+1/p-1 smiles = [Na]Oc1ccccc1 esmiles = [Na]Oc1ccccc1 theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{0} theory = dft xc = b3lyp basis = 6-311++G(2d,2p) charge = 0 mult = 1 solvation_type = COSMO twirl webpage = TwirlMol Link image webpage = GIF Image Link Eigevalue Spectra ---- ---- 13.61 eV --- -- --- --- -- --- --- -- --- ---- ---- - - - - -- - - - - -- ---- ---- -- -- -- - -- -- -- - - - - - -- 8 - - - - 6 - - - - -- -- -- - 8 - - - - -- -- -- - ---------- LUMO= -0.79 eV HOMO= -5.59 eV ++++++++++ ++++ ++++ ++++++++++ ++++ ++++ ++++++++++ ++++ ++++ ++++ ++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ -31.39 eV +++ ++ +++
spin eig occ ---------------------------- restricted -60.32 2.00 restricted -31.39 2.00 restricted -31.38 2.00 restricted -31.38 2.00 restricted -26.65 2.00 restricted -22.89 2.00 restricted -20.22 2.00 restricted -19.54 2.00 restricted -16.42 2.00 restricted -15.83 2.00 restricted -13.79 2.00 restricted -12.46 2.00 restricted -12.34 2.00 restricted -11.38 2.00 restricted -11.30 2.00 restricted -10.72 2.00 restricted -9.75 2.00 restricted -9.44 2.00 restricted -8.84 2.00 restricted -7.03 2.00 restricted -6.94 2.00 restricted -5.59 2.00 restricted -0.79 0.00 restricted -0.38 0.00 restricted -0.12 0.00 restricted 0.03 0.00 restricted 0.09 0.00 restricted 0.30 0.00 restricted 0.40 0.00 restricted 0.54 0.00 restricted 0.68 0.00 restricted 0.89 0.00 restricted 0.95 0.00 restricted 1.00 0.00 restricted 1.09 0.00 restricted 1.50 0.00 restricted 1.61 0.00 restricted 1.72 0.00 restricted 1.99 0.00 restricted 2.32 0.00 restricted 2.58 0.00 restricted 2.71 0.00 restricted 2.72 0.00 restricted 2.87 0.00 restricted 2.98 0.00 restricted 3.26 0.00 restricted 3.30 0.00 restricted 3.56 0.00 restricted 3.56 0.00 restricted 3.66 0.00 restricted 3.69 0.00 restricted 3.74 0.00 restricted 3.77 0.00 restricted 4.06 0.00 restricted 4.06 0.00 restricted 4.17 0.00 restricted 4.73 0.00 restricted 4.80 0.00 restricted 5.11 0.00 restricted 5.56 0.00 restricted 5.60 0.00 restricted 5.62 0.00 restricted 5.94 0.00 restricted 6.15 0.00 restricted 6.41 0.00 restricted 6.59 0.00 restricted 7.13 0.00 restricted 7.31 0.00 restricted 7.64 0.00 restricted 7.68 0.00 restricted 8.04 0.00 restricted 8.25 0.00 restricted 8.36 0.00 restricted 8.63 0.00 restricted 8.66 0.00 restricted 9.00 0.00 restricted 9.32 0.00 restricted 9.41 0.00 restricted 9.78 0.00 restricted 9.93 0.00 restricted 10.55 0.00 restricted 10.72 0.00 restricted 10.93 0.00 restricted 11.53 0.00 restricted 11.78 0.00 restricted 11.94 0.00 restricted 12.43 0.00 restricted 12.73 0.00 restricted 13.04 0.00 restricted 13.40 0.00 restricted 13.61 0.00
+----------------------------------------+ | Vibrational Density of States Analysis | +----------------------------------------+ Total number of frequencies = 39 Total number of negative frequencies = 0 Number of lowest frequencies = 6 (frequency threshold = 500 ) Exact dos norm = 33.000 Generating vibrational DOS Generating model vibrational DOS to have a proper norm 10.00 33.01 6.00 33.00 50.00 32.64 5.64 33.00 100.00 32.34 5.34 33.00 Generating IR Spectra Writing vibrational density of states (DOS) to vdos.dat Writing model vibrational density of states (DOS_FIXED) to vdos-model.dat Writing IR spectra to irdos.dat Temperature= 298.15 zero-point correction to energy = 58.281 kcal/mol ( 0.092877) vibrational contribution to enthalpy correction = 60.987 kcal/mol ( 0.097190) vibrational contribution to Entropy = 18.010 cal/mol-k hindered rotor enthalpy correction = 0.000 kcal/mol ( 0.000000) hindered rotor entropy correction = 0.000 cal/mol-k
DOS sigma = 10.000000 - vibrational DOS enthalpy correction = 0.097191 kcal/mol ( 60.988 kcal/mol) - model vibrational DOS enthalpy correction = 0.097184 kcal/mol ( 60.984 kcal/mol) - vibrational DOS Entropy = 0.000029 ( 18.124 cal/mol-k) - model vibrational DOS Entropy = 0.000029 ( 18.108 cal/mol-k) - original gas Energy = -469.303229 (-294492.220 kcal/mol) - original gas Enthalpy = -469.202264 (-294428.864 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -469.202262 (-294428.863 kcal/mol, delta= 0.001) - model DOS gas Enthalpy = -469.202270 (-294428.867 kcal/mol, delta= -0.003) - original gas Entropy = 0.000138 ( 86.777 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000138 ( 86.891 cal/mol-k,delta= 0.114) - model DOS gas Entropy = 0.000138 ( 86.875 cal/mol-k,delta= 0.098) - original gas Free Energy = -469.243495 (-294454.736 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -469.243547 (-294454.769 kcal/mol, delta= -0.033) - model DOS gas Free Energy = -469.243547 (-294454.769 kcal/mol, delta= -0.033) - original sol Free Energy = -469.279209 (-294477.147 kcal/mol) - unadjusted DOS sol Free Energy = -469.279262 (-294477.180 kcal/mol) - model DOS sol Free Energy = -469.279261 (-294477.180 kcal/mol) DOS sigma = 50.000000 - vibrational DOS enthalpy correction = 0.096932 kcal/mol ( 60.826 kcal/mol) - model vibrational DOS enthalpy correction = 0.097336 kcal/mol ( 61.079 kcal/mol) - vibrational DOS Entropy = 0.000028 ( 17.416 cal/mol-k) - model vibrational DOS Entropy = 0.000029 ( 18.325 cal/mol-k) - original gas Energy = -469.303229 (-294492.220 kcal/mol) - original gas Enthalpy = -469.202264 (-294428.864 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -469.202522 (-294429.025 kcal/mol, delta= -0.162) - model DOS gas Enthalpy = -469.202118 (-294428.772 kcal/mol, delta= 0.092) - original gas Entropy = 0.000138 ( 86.777 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000137 ( 86.183 cal/mol-k,delta= -0.594) - model DOS gas Entropy = 0.000139 ( 87.092 cal/mol-k,delta= 0.315) - original gas Free Energy = -469.243495 (-294454.736 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -469.243470 (-294454.721 kcal/mol, delta= 0.016) - model DOS gas Free Energy = -469.243498 (-294454.738 kcal/mol, delta= -0.002) - original sol Free Energy = -469.279209 (-294477.147 kcal/mol) - unadjusted DOS sol Free Energy = -469.279184 (-294477.132 kcal/mol) - model DOS sol Free Energy = -469.279212 (-294477.149 kcal/mol) DOS sigma = 100.000000 - vibrational DOS enthalpy correction = 0.096752 kcal/mol ( 60.713 kcal/mol) - model vibrational DOS enthalpy correction = 0.097503 kcal/mol ( 61.184 kcal/mol) - vibrational DOS Entropy = 0.000024 ( 15.175 cal/mol-k) - model vibrational DOS Entropy = 0.000027 ( 16.632 cal/mol-k) - original gas Energy = -469.303229 (-294492.220 kcal/mol) - original gas Enthalpy = -469.202264 (-294428.864 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -469.202702 (-294429.138 kcal/mol, delta= -0.275) - model DOS gas Enthalpy = -469.201951 (-294428.667 kcal/mol, delta= 0.197) - original gas Entropy = 0.000138 ( 86.777 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000134 ( 83.942 cal/mol-k,delta= -2.835) - model DOS gas Entropy = 0.000136 ( 85.399 cal/mol-k,delta= -1.378) - original gas Free Energy = -469.243495 (-294454.736 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -469.242585 (-294454.166 kcal/mol, delta= 0.571) - model DOS gas Free Energy = -469.242527 (-294454.129 kcal/mol, delta= 0.607) - original sol Free Energy = -469.279209 (-294477.147 kcal/mol) - unadjusted DOS sol Free Energy = -469.278300 (-294476.577 kcal/mol) - model DOS sol Free Energy = -469.278241 (-294476.540 kcal/mol) Normal Mode Frequency (cm-1) IR Intensity (arbitrary) ----------- ---------------- ------------------------ 1 -0.000 0.065 2 0.000 3.061 3 0.000 2.437 4 0.000 0.575 5 0.000 0.339 6 0.000 0.177 7 40.940 10.606 8 51.240 8.547 9 224.210 1.019 10 320.940 4.089 11 432.360 0.171 12 440.480 2.074 13 526.010 4.570 14 605.920 11.809 15 633.870 0.479 16 705.070 12.284 17 762.080 14.594 18 816.930 0.011 19 869.080 8.084 20 873.020 4.626 21 956.480 0.005 22 962.900 0.020 23 1005.530 13.137 24 1049.140 1.953 25 1099.880 0.535 26 1170.570 1.280 27 1179.750 9.142 28 1285.280 1.256 29 1349.190 2.138 30 1369.400 94.520 31 1485.250 0.203 32 1546.490 123.918 33 1588.130 3.633 34 1629.680 36.974 35 3139.100 1.821 36 3141.510 0.040 37 3156.220 1.658 38 3179.620 6.511 39 3191.390 1.642 No Hindered Rotor Data +-------------------------------------+ | Reactions Contained in the Database | +-------------------------------------+ Reactions Containing INCHIKEY = NESLWCLHZZISNB-UHFFFAOYSA-M Reactionid Erxn(gas) Hrxn(gas) Grxn(gas) delta_Solv Grxn(aq) ReactionType Reaction 6861 -10.376 -9.949 -15.988 1.317 -14.671 A + B + CD --> AC + BD "O[Na] + COc1ccccc1 --> [Na]Oc1ccccc1 + CO" 6860 -10.376 -9.949 -15.988 1.317 -14.671 A + B + CD --> AC + BD "O[Na] + COc1ccccc1 --> [Na]Oc1ccccc1 + CO"
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