Results from an EMSL Arrows Calculation
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The id(s) for emsiles = ON1CN(CN(C1)N(=O)=O)N(=O)=O theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{0} are: 16228 Use id=% instead of esmiles to print other entries. mformula = C3H7N5O5 iupac = 1-hydroxy-3,5-dinitro-1,3,5-triazinane PubChem = 86075163 PubChem LCSS = 86075163 synonyms = 1,3,5-TRIAZIN-1(2H)-YLOXY, TETRAHYDRO-3,5-DINITRO-; HE285803; HE337167 Search Links to Other Online Resources (may not be available): - Google Structure Search - EPA CompTox Database - Chemical Entities of Biological Interest (ChEBI) - NIH ChemIDplus - A TOXNET DATABASE - The Human Metabolome Database (HMDB) - OECD eChemPortal - Google Scholar +==================================================+ || Molecular Calculation || +==================================================+ Id = 16228 NWOutput = Link to NWChem Output (download) Datafiles: mo_orbital_tifany-113905.out00-865214-2020-12-20-11:43:22 (download) homo-restricted.cube-865214-2020-12-20-11:43:22 (download) lumo-restricted.cube-865214-2020-12-20-11:43:22 (download) image_resset: api/image_reset/16228 Calculation performed by we20961 Numbers of cpus used for calculation = 2 Calculation walltime = 192468.700000 seconds (2 days 5 hours 27 minutes 48 seconds) +----------------+ | Energetic Data | +----------------+ Id = 16228 iupac = 1-hydroxy-3,5-dinitro-1,3,5-triazinane mformula = C3H7N5O5 inchi = InChI=1S/C3H7N5O5/c9-6-2-4(7(10)11)1-5(3-6)8(12)13/h9H,1-3H2 inchikey = RWXBTPOULBQJOY-UHFFFAOYSA-N esmiles = ON1CN(CN(C1)N(=O)=O)N(=O)=O theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{0} calculation_type = ovc theory = dft xc = b3lyp basis = 6-311++G(2d,2p) charge,mult = 0 1 energy = -768.367830 Hartrees enthalpy correct.= 0.156316 Hartrees entropy = 106.913 cal/mol-K solvation energy = -14.236 kcal/mol solvation_type = COSMO Sitkoff cavity dispersion = 2.514 kcal/mol Honig cavity dispersion = 8.268 kcal/mol ASA solvent accesible surface area = 330.712 Angstrom2 ASA solvent accesible volume = 309.906 Angstrom3 +-----------------+ | Structural Data | +-----------------+
JSmol: an open-source HTML5 viewer for chemical structures in 3D
Number of Atoms = 20 Units are Angstrom for bonds and degrees for angles Type I J K L M Value ----------- ----- ----- ----- ----- ----- ---------- 1 Stretch N1 N2 1.38497 2 Stretch N1 C5 1.47923 3 Stretch N1 C6 1.47503 4 Stretch N2 O3 1.22353 5 Stretch N2 O4 1.22536 6 Stretch C5 N10 1.44527 7 Stretch C5 H11 1.08057 8 Stretch C5 H12 1.08882 9 Stretch C6 N7 1.45144 10 Stretch C6 H8 1.08296 11 Stretch C6 H9 1.08980 12 Stretch N7 C13 1.45791 13 Stretch N7 O19 1.44406 14 Stretch N10 C13 1.47915 15 Stretch N10 N16 1.40805 16 Stretch C13 H14 1.08491 17 Stretch C13 H15 1.08578 18 Stretch N16 O17 1.21886 19 Stretch N16 O18 1.22245 20 Stretch O19 H20 0.96317 21 Bend N2 N1 C5 114.59009 22 Bend N2 N1 C6 117.38942 23 Bend C5 N1 C6 116.09341 24 Bend N1 N2 O3 117.62554 25 Bend N1 N2 O4 116.03959 26 Bend O3 N2 O4 126.27447 27 Bend N1 C5 N10 108.39262 28 Bend N1 C5 H11 110.12383 29 Bend N1 C5 H12 110.31130 30 Bend N10 C5 H11 110.05374 31 Bend N10 C5 H12 108.00523 32 Bend H11 C5 H12 109.91341 33 Bend N1 C6 N7 111.91245 34 Bend N1 C6 H8 107.98286 35 Bend N1 C6 H9 109.61706 36 Bend N7 C6 H8 110.80081 37 Bend N7 C6 H9 107.33870 38 Bend H8 C6 H9 109.16167 39 Bend C6 N7 C13 111.66945 40 Bend C6 N7 O19 107.53441 41 Bend C13 N7 O19 108.74117 42 Bend C5 N10 C13 116.40961 43 Bend C5 N10 N16 116.78218 44 Bend C13 N10 N16 116.84962 45 Bend N7 C13 N10 112.21756 46 Bend N7 C13 H14 109.42430 47 Bend N7 C13 H15 108.09195 48 Bend N10 C13 H14 107.46278 49 Bend N10 C13 H15 110.10195 50 Bend H14 C13 H15 109.52098 51 Bend N10 N16 O17 117.36163 52 Bend N10 N16 O18 116.35129 53 Bend O17 N16 O18 126.20733 54 Bend N7 O19 H20 103.40679 55 Dihedral N1 C5 N10 C13 -56.92271 56 Dihedral N1 C5 N10 N16 87.71792 57 Dihedral N1 C6 N7 C13 -59.87289 58 Dihedral N1 C6 N7 O19 59.34372 59 Dihedral N2 N1 C5 N10 172.23332 60 Dihedral N2 N1 C5 H11 -67.32274 61 Dihedral N2 N1 C5 H12 54.17201 62 Dihedral N2 N1 C6 N7 -115.57872 63 Dihedral N2 N1 C6 H8 6.62958 64 Dihedral N2 N1 C6 H9 125.44877 65 Dihedral O3 N2 N1 C5 -167.49690 66 Dihedral O3 N2 N1 C6 -26.06419 67 Dihedral O4 N2 N1 C5 15.15031 68 Dihedral O4 N2 N1 C6 156.58302 69 Dihedral C5 N1 C6 N7 25.28043 70 Dihedral C5 N1 C6 H8 147.48873 71 Dihedral C5 N1 C6 H9 -93.69209 72 Dihedral C5 N10 C13 N7 24.24294 73 Dihedral C5 N10 C13 H14 144.57965 74 Dihedral C5 N10 C13 H15 -96.20105 75 Dihedral C5 N10 N16 O17 15.48114 76 Dihedral C5 N10 N16 O18 -167.56233 77 Dihedral C6 N1 C5 N10 30.28472 78 Dihedral C6 N1 C5 H11 150.72865 79 Dihedral C6 N1 C5 H12 -87.77659 80 Dihedral C6 N7 C13 N10 34.67629 81 Dihedral C6 N7 C13 H14 -84.51648 82 Dihedral C6 N7 C13 H15 156.27750 83 Dihedral C6 N7 O19 H20 115.66430 84 Dihedral N7 C13 N10 N16 -120.37349 85 Dihedral H8 C6 N7 C13 179.54431 86 Dihedral H8 C6 N7 O19 -61.23907 87 Dihedral H9 C6 N7 C13 60.43770 88 Dihedral H9 C6 N7 O19 179.65432 89 Dihedral N10 C13 N7 O19 -83.82297 90 Dihedral H11 C5 N10 C13 -177.41023 91 Dihedral H11 C5 N10 N16 -32.76960 92 Dihedral H12 C5 N10 C13 62.59663 93 Dihedral H12 C5 N10 N16 -152.76274 94 Dihedral C13 N7 O19 H20 -123.26303 95 Dihedral C13 N10 N16 O17 159.96476 96 Dihedral C13 N10 N16 O18 -23.07871 97 Dihedral H14 C13 N7 O19 156.98427 98 Dihedral H14 C13 N10 N16 -0.03678 99 Dihedral H15 C13 N7 O19 37.77825 100 Dihedral H15 C13 N10 N16 119.18252
+-----------------+ | Eigenvalue Data | +-----------------+ Id = 16228 iupac = 1-hydroxy-3,5-dinitro-1,3,5-triazinane mformula = C3H7N5O5 InChI = InChI=1S/C3H7N5O5/c9-6-2-4(7(10)11)1-5(3-6)8(12)13/h9H,1-3H2 smiles = ON1CN(CN(C1)N(=O)=O)N(=O)=O esmiles = ON1CN(CN(C1)N(=O)=O)N(=O)=O theory{dft} xc{b3lyp} basis{6-311++G(2d,2p)} solvation_type{COSMO} ^{0} theory = dft xc = b3lyp basis = 6-311++G(2d,2p) charge = 0 mult = 1 solvation_type = COSMO twirl webpage = TwirlMol Link image webpage = GIF Image Link Eigevalue Spectra ---------- 13.91 eV --- -- --- ---- ---- -- -- -- - 6 - - - - 8 - - - - 8 - - - - 7 - - - - 6 - - - - 7 - - - - 7 - - - - 9 - - - - -- -- -- - - - - - -- -- -- -- - ---- ---- LUMO= -2.47 eV HOMO= -7.56 eV ++++ ++++ ++ ++ ++ + ++ ++ ++ + +++ ++ +++ ++++ ++++ ++++ ++++ ++++ ++++ + + + + ++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ ++++++++++ +++ ++ +++ -34.90 eV ++++ ++++
spin eig occ ---------------------------- restricted -34.90 2.00 restricted -34.75 2.00 restricted -30.02 2.00 restricted -30.00 2.00 restricted -29.83 2.00 restricted -28.04 2.00 restricted -26.71 2.00 restricted -24.39 2.00 restricted -21.51 2.00 restricted -21.13 2.00 restricted -19.18 2.00 restricted -17.94 2.00 restricted -16.63 2.00 restricted -16.46 2.00 restricted -16.29 2.00 restricted -15.98 2.00 restricted -15.89 2.00 restricted -15.59 2.00 restricted -15.15 2.00 restricted -14.80 2.00 restricted -14.42 2.00 restricted -13.52 2.00 restricted -12.97 2.00 restricted -12.57 2.00 restricted -12.19 2.00 restricted -12.01 2.00 restricted -11.70 2.00 restricted -10.30 2.00 restricted -10.01 2.00 restricted -9.65 2.00 restricted -9.50 2.00 restricted -9.25 2.00 restricted -9.09 2.00 restricted -8.93 2.00 restricted -8.82 2.00 restricted -8.32 2.00 restricted -7.56 2.00 restricted -2.47 0.00 restricted -2.31 0.00 restricted -0.33 0.00 restricted 0.24 0.00 restricted 0.34 0.00 restricted 0.42 0.00 restricted 0.82 0.00 restricted 1.00 0.00 restricted 1.02 0.00 restricted 1.20 0.00 restricted 1.23 0.00 restricted 1.67 0.00 restricted 2.09 0.00 restricted 2.23 0.00 restricted 2.44 0.00 restricted 2.52 0.00 restricted 2.56 0.00 restricted 2.68 0.00 restricted 2.71 0.00 restricted 2.86 0.00 restricted 2.99 0.00 restricted 3.26 0.00 restricted 3.31 0.00 restricted 3.43 0.00 restricted 3.47 0.00 restricted 3.55 0.00 restricted 3.63 0.00 restricted 3.72 0.00 restricted 3.90 0.00 restricted 3.94 0.00 restricted 4.29 0.00 restricted 4.47 0.00 restricted 4.54 0.00 restricted 4.63 0.00 restricted 4.88 0.00 restricted 5.17 0.00 restricted 5.18 0.00 restricted 5.26 0.00 restricted 5.51 0.00 restricted 5.76 0.00 restricted 5.89 0.00 restricted 6.05 0.00 restricted 6.34 0.00 restricted 6.36 0.00 restricted 6.56 0.00 restricted 6.67 0.00 restricted 6.83 0.00 restricted 6.97 0.00 restricted 7.14 0.00 restricted 7.20 0.00 restricted 7.31 0.00 restricted 7.49 0.00 restricted 7.66 0.00 restricted 7.72 0.00 restricted 7.80 0.00 restricted 7.91 0.00 restricted 8.17 0.00 restricted 8.31 0.00 restricted 8.39 0.00 restricted 8.47 0.00 restricted 8.55 0.00 restricted 8.69 0.00 restricted 8.74 0.00 restricted 9.00 0.00 restricted 9.07 0.00 restricted 9.10 0.00 restricted 9.39 0.00 restricted 9.44 0.00 restricted 9.56 0.00 restricted 9.67 0.00 restricted 9.86 0.00 restricted 10.18 0.00 restricted 10.42 0.00 restricted 10.68 0.00 restricted 10.96 0.00 restricted 11.11 0.00 restricted 11.40 0.00 restricted 11.76 0.00 restricted 11.94 0.00 restricted 12.48 0.00 restricted 12.58 0.00 restricted 13.04 0.00 restricted 13.91 0.00
+----------------------------------------+ | Vibrational Density of States Analysis | +----------------------------------------+ Total number of frequencies = 60 Total number of negative frequencies = 0 Number of lowest frequencies = 13 (frequency threshold = 500 ) Exact dos norm = 54.000 Generating vibrational DOS Generating model vibrational DOS to have a proper norm 10.00 54.00 13.00 54.00 50.00 53.53 12.53 54.00 100.00 52.92 11.92 54.00 Generating IR Spectra Writing vibrational density of states (DOS) to vdos.dat Writing model vibrational density of states (DOS_FIXED) to vdos-model.dat Writing IR spectra to irdos.dat Temperature= 298.15 zero-point correction to energy = 90.426 kcal/mol ( 0.144104) vibrational contribution to enthalpy correction = 95.721 kcal/mol ( 0.152541) vibrational contribution to Entropy = 34.278 cal/mol-k hindered rotor enthalpy correction = 0.000 kcal/mol ( 0.000000) hindered rotor entropy correction = 0.000 cal/mol-k
DOS sigma = 10.000000 - vibrational DOS enthalpy correction = 0.152544 kcal/mol ( 95.723 kcal/mol) - model vibrational DOS enthalpy correction = 0.152548 kcal/mol ( 95.726 kcal/mol) - vibrational DOS Entropy = 0.000055 ( 34.455 cal/mol-k) - model vibrational DOS Entropy = 0.000055 ( 34.465 cal/mol-k) - original gas Energy = -768.367830 (-482158.089 kcal/mol) - original gas Enthalpy = -768.211514 (-482059.999 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -768.211511 (-482059.997 kcal/mol, delta= 0.002) - model DOS gas Enthalpy = -768.211507 (-482059.995 kcal/mol, delta= 0.005) - original gas Entropy = 0.000170 ( 106.913 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000171 ( 107.090 cal/mol-k,delta= 0.177) - model DOS gas Entropy = 0.000171 ( 107.099 cal/mol-k,delta= 0.186) - original gas Free Energy = -768.262312 (-482091.875 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -768.262393 (-482091.926 kcal/mol, delta= -0.051) - model DOS gas Free Energy = -768.262393 (-482091.926 kcal/mol, delta= -0.051) - original sol Free Energy = -768.284999 (-482106.112 kcal/mol) - unadjusted DOS sol Free Energy = -768.285080 (-482106.163 kcal/mol) - model DOS sol Free Energy = -768.285080 (-482106.163 kcal/mol) DOS sigma = 50.000000 - vibrational DOS enthalpy correction = 0.152230 kcal/mol ( 95.526 kcal/mol) - model vibrational DOS enthalpy correction = 0.152743 kcal/mol ( 95.848 kcal/mol) - vibrational DOS Entropy = 0.000054 ( 34.055 cal/mol-k) - model vibrational DOS Entropy = 0.000056 ( 35.159 cal/mol-k) - original gas Energy = -768.367830 (-482158.089 kcal/mol) - original gas Enthalpy = -768.211514 (-482059.999 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -768.211825 (-482060.194 kcal/mol, delta= -0.195) - model DOS gas Enthalpy = -768.211312 (-482059.873 kcal/mol, delta= 0.127) - original gas Entropy = 0.000170 ( 106.913 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000170 ( 106.690 cal/mol-k,delta= -0.223) - model DOS gas Entropy = 0.000172 ( 107.793 cal/mol-k,delta= 0.880) - original gas Free Energy = -768.262312 (-482091.875 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -768.262517 (-482092.004 kcal/mol, delta= -0.129) - model DOS gas Free Energy = -768.262528 (-482092.011 kcal/mol, delta= -0.136) - original sol Free Energy = -768.284999 (-482106.112 kcal/mol) - unadjusted DOS sol Free Energy = -768.285204 (-482106.240 kcal/mol) - model DOS sol Free Energy = -768.285215 (-482106.248 kcal/mol) DOS sigma = 100.000000 - vibrational DOS enthalpy correction = 0.151871 kcal/mol ( 95.300 kcal/mol) - model vibrational DOS enthalpy correction = 0.153069 kcal/mol ( 96.052 kcal/mol) - vibrational DOS Entropy = 0.000050 ( 31.244 cal/mol-k) - model vibrational DOS Entropy = 0.000054 ( 33.631 cal/mol-k) - original gas Energy = -768.367830 (-482158.089 kcal/mol) - original gas Enthalpy = -768.211514 (-482059.999 kcal/mol, delta= 0.000) - unajusted DOS gas Enthalpy = -768.212184 (-482060.420 kcal/mol, delta= -0.421) - model DOS gas Enthalpy = -768.210986 (-482059.668 kcal/mol, delta= 0.331) - original gas Entropy = 0.000170 ( 106.913 cal/mol-k,delta= 0.000) - unajusted DOS gas Entropy = 0.000166 ( 103.879 cal/mol-k,delta= -3.034) - model DOS gas Entropy = 0.000169 ( 106.265 cal/mol-k,delta= -0.648) - original gas Free Energy = -768.262312 (-482091.875 kcal/mol, delta= 0.000) - unadjusted DOS gas Free Energy = -768.261540 (-482091.391 kcal/mol, delta= 0.484) - model DOS gas Free Energy = -768.261476 (-482091.351 kcal/mol, delta= 0.524) - original sol Free Energy = -768.284999 (-482106.112 kcal/mol) - unadjusted DOS sol Free Energy = -768.284228 (-482105.628 kcal/mol) - model DOS sol Free Energy = -768.284163 (-482105.587 kcal/mol) Normal Mode Frequency (cm-1) IR Intensity (arbitrary) ----------- ---------------- ------------------------ 1 -0.000 0.078 2 -0.000 0.021 3 0.000 0.094 4 0.000 0.105 5 0.000 0.618 6 0.000 0.040 7 36.720 1.039 8 45.920 0.971 9 87.210 0.187 10 108.020 0.289 11 169.170 0.235 12 222.890 2.161 13 281.920 3.817 14 299.810 0.442 15 338.200 4.954 16 367.340 13.020 17 395.520 2.518 18 414.210 2.149 19 419.680 1.037 20 503.570 1.040 21 547.330 0.492 22 609.390 5.026 23 641.520 7.499 24 677.590 1.225 25 768.170 6.017 26 773.220 2.643 27 786.310 11.712 28 828.640 7.425 29 857.970 1.178 30 885.070 8.816 31 937.490 38.545 32 961.330 3.892 33 969.530 5.772 34 1033.520 36.205 35 1121.050 6.644 36 1137.550 12.365 37 1173.910 4.930 38 1207.640 2.799 39 1226.020 2.971 40 1282.320 94.700 41 1299.910 49.726 42 1310.240 24.211 43 1324.780 19.960 44 1348.860 6.966 45 1372.090 3.603 46 1377.580 6.052 47 1413.750 8.734 48 1424.970 6.823 49 1491.500 9.977 50 1496.770 3.480 51 1503.250 7.273 52 1594.260 54.415 53 1610.200 85.218 54 3078.410 0.849 55 3090.880 0.752 56 3115.130 0.077 57 3154.790 0.374 58 3169.190 0.131 59 3194.320 1.256 60 3797.770 14.453 No Hindered Rotor Data +-------------------------------------+ | Reactions Contained in the Database | +-------------------------------------+ Reactions Containing INCHIKEY = RWXBTPOULBQJOY-UHFFFAOYSA-N Reactionid Erxn(gas) Hrxn(gas) Grxn(gas) delta_Solv Grxn(aq) ReactionType Reaction 18641 -195.549 -189.609 -180.884 205.285 24.401 A + B --> AB "ON1CN(CN(C1)N(=O)=O)N(=O)=O + [H+] ^{1} --> ON1CN(CN(C1)N(=O)=O)N(=[OH])=O ^{1}" 17238 -60.328 -63.074 -77.454 23.885 -53.568 ABCD + E --> A + BC + DE "ON1CN(CN(C1)N(=O)=O)N(=O)=O + [OH-] ^{-1} --> ON1C[N][CH]N(C1)N(=O)=O + O=[N]=O ^{-1} + O" 531 -24.336 -24.048 -26.175 0.000 -26.175 AB + C --> AC + B "O=N(=O)N1CN(N(=O)=O)CN(N(=O)=O)C1 theory{pspw4} + [OH-] theory{pspw4} --> O=N(=O)N1CN(O)CN(N(=O)=O)C1 theory{pspw4} + O=N[O-] theory{pspw4}" 412 -34.044 -33.727 -36.070 28.819 -7.251 AB + C --> AC + B "O=N(=O)N1CN(N(=O)=O)CN(N(=O)=O)C1 + [OH-] --> O=N(=O)N1CN(O)CN(N(=O)=O)C1 + O=N[O-]"
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KEYWORDs - reaction: :reaction chinese_room: :chinese_room molecule: :molecule nmr: :nmr predict: :predict submitesmiles: :submitesmiles nosubmitmissingesmiles resubmitmissingesmiles submitmachines: :submitmachines useallentries nomodelcorrect eigenvalues: :eigenvalues frequencies: :frequencies nwoutput: :nwoutput xyzfile: :xyzfile alleigs: :alleigs allfreqs: :allfreqs reactionenumerate: energytype:[erxn(gas) hrxn(gas) grxn(gas) delta_solvation grxn(aq)] :energytype energytype:[kcal/mol kj/mol ev cm-1 ry hartree au] :energytype tablereactions: reaction: ... :reaction reaction: ... :reaction ... :tablereactions tablemethods: method: ... :method method: ... :method ... :tablemethods :reactionenumerate rotatebonds xyzinput: label: :label xyzdata: ... xyz data ... :xyzdata :xyzinput submitHf: :submitHf nmrexp: :nmrexp findreplace: old text | new text :findreplace listnwjobs fetchnwjob: :fetchnwjob pushnwjob: :pushnwjob printcsv: :printcsv printeig: :printeig printfreq: :printfreq printxyz: :printxyz printjobinfo: :printjobinfo printnwout: :printnwout badids: :badids hup_string: database: table: request_table: listallesmiles queuecheckThis software service and its documentation were developed at the Environmental Molecular Sciences Laboratory (EMSL) at Pacific Northwest National Laboratory, a multiprogram national laboratory, operated for the U.S. Department of Energy by Battelle under Contract Number DE-AC05-76RL01830. Support for this work was provided by the Department of Energy Office of Biological and Environmental Research, and Department of Defense environmental science and technology program (SERDP). THE SOFTWARE SERVICE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE SERVICE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE SERVICE.